PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN01298.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 341aa    MW: 38232.8 Da    PI: 6.0641
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN01298.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-12162207555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h ++ErrRR+++ ++f  L   +P +      K +Ka++L+ A++Y+k+Lq
  KHN01298.1 162 HIMAERRRRQELTERFIALSATIPGL-----NKTDKASVLRAAIDYVKQLQ 207
                 999**********************8.....6******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.71E-17156218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.434157206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.22E-12162211No hitNo description
Gene3DG3DSA:4.10.280.102.3E-17162219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-10162207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-15163212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MEESWENWHL HMETDCENDF LGKCHGTDDD EFFRDILQQP PPAAFSSESE SDHSFLAVQN  60
TSSFPNDGAV LSPRNYLVKS SSSNSLVSQN ASKRPRRLSS PRTYILSFDN STMVPATPET  120
RPRSSNNSPL PAKRALESPG PVARRPNQGA KKIRTSSQTI DHIMAERRRR QELTERFIAL  180
SATIPGLNKT DKASVLRAAI DYVKQLQERV QELEKQDKKR STESVIFIKK PDPNGNDEDT  240
TSTETNCSIL PEMEARVMGK EVLIEIHCEK ENGVELKILD HLENLHLSVT GSSVLPFGNS  300
ALCITITTQM GDGYQMTVND LVKNLRQLFS KSHVLSDSDP Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003529790.10.0PREDICTED: transcription factor bHLH18-like
TrEMBLA0A0B2P1540.0A0A0B2P154_GLYSO; Transcription factor bHLH25
STRINGGLYMA07G03060.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-44bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]